rs7329234 chr13:110471239 C>T

Sequence
tgcgtgaacgccacacggggctcc[C/T]ctgtaggggggaatggatgggatg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) primary B-CLL cells
ASB for transcription factors
IKZF1_HUMAN ATF7_HUMAN FOXK2_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 1.60 -3.02 3.0·10-41.00 1.50 n/a n/a
ATF7_HUMAN 2.41 n/a 4.2·10-41.00 1.50 n/a No Hit
FOXK2_HUMAN 2.56 -4.43 1.8·10-31.00 1.50 n/a No Hit
IKZF2_HUMAN 1.34 -2.83 5.5·10-31.00 1.50 n/a n/a
KLF5_HUMAN 2.54 -2.58 0.021.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous

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