rs7329261 chr13:75300392 T>C
- Sequence
tgtctatattggtatgggcatttt[T/C]ctagggccacaaaaatgaaggggg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN ELF1_HUMAN ATF7_HUMAN NFAC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | n/a | 2.73 | 4.00 | n/a | n/a | |||
| ELF1_HUMAN | -5.17 | 3.09 | 2.00 | n/a | No Hit | |||
| ATF7_HUMAN | -4.79 | 2.81 | 1.50 | n/a | No Hit | |||
| NFAC3_HUMAN | -2.55 | 2.79 | 1.00 | -0.47 | Weak Discordant |
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Motif analysis
