rs7329675 chr13:33543010 G>T
- Sequence
tgtggcgactctgaagcggaagct[G/T]cctgtaggaggagctttacaaacc
- ASB in cell types
- RH4 (alveolar rhabdomyosarcoma) CD14+ monocytes breast tumor pancreas
- ASB for transcription factors
- CTCF_HUMAN ESR1_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.98 | 0.22 | 1.20 | -1.29 | Weak Concordant | |||
| ESR1_HUMAN | 1.94 | -0.45 | 1.25 | n/a | No Hit | |||
| STAT1_HUMAN | 2.48 | 0.03 | 1.67 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
