rs7331766 chr13:79394076 T>G
- Sequence
gtttacacagtagcaaagccggga[T/G]cccccgcagatatcccctgagatt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) LNCaP (prostate carcinoma) HEK293 (embryonic kidney) LN95(Prostate adenocarcinoma)
- ASB for transcription factors
- FOXK2_HUMAN FOXA1_HUMAN ZN382_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 0.34 | 3.04 | 2.50 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.32 | 0.85 | 1.97 | n/a | No Hit | |||
| ZN382_HUMAN | 2.98 | -5.49 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Vagina