rs7331894 chr13:99200698 C>T
- Sequence
gaggtgagccctcccctaccgacg[C/T]acttcccttccccggcaggaagga
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) MDM(monocyte derived macrophages) monocytes from periferal blood monocyte-derived dendritic cells
- ASB for transcription factors
- SPI1_HUMAN ESR1_HUMAN HCFC1_HUMAN BRD2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.97 | 0.07 | 1.56 | -0.25 | Weak Concordant | |||
| ESR1_HUMAN | 2.06 | -0.29 | 2.50 | n/a | No Hit | |||
| HCFC1_HUMAN | 1.74 | n/a | 2.00 | n/a | n/a | |||
| BRD2_HUMAN | -0.19 | 1.43 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Heart_Atrial_Appendage, Heart_Left_Ventricle, Testis, Whole_Blood