rs7335046 chr13:99389484 G>C

Sequence
tcagttctgtgacctttctggaat[G/C]ttctgtgtgagctgccctgggagt
ASB in cell types
iPS-derived dermal fibroblasts
ASB for transcription factors
RARA_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RARA_HUMAN 2.83 -2.82 1.1·10-31.00 1.00 4.99 Discordant
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Motif analysis

RARA_HUMAN Discordant
RARA_HUMAN pic

Genetic associations

EMBL-EBI basal cell carcinoma
GRASP cutaneous basal cell carcinoma (skin cancer),  cutaneous squamous cell carcinoma (skin cancer),  diastolic blood pressure (dbp),  systolic blood pressure (sbp)
GTEx eQTL Adipose_Visceral_Omentum,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Testis,  Whole_Blood

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