rs733544 chr8:21978117 A>G

Sequence
gtatctgactttatgctgttcctc[A/G]aacggccacaggctagcacctggg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.79 -2.86 2.0·10-31.00 1.00 n/a n/a
CTCF_HUMAN 1.38 0.25 0.021.00 1.09 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Gastroesophageal_Junction,  Nerve_Tibial,  Testis

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