rs7336001 chr13:73421740 G>C

Sequence
ggctttggctgggacaatttgtga[G/C]tggcaacaacccaaagaaaaccag
ASB in cell types
MCF10A (breast epithelial cells) 22RV1 (prostate carcinoma)
ASB for transcription factors
NCOA3_HUMAN P63_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NCOA3_HUMAN n/a 2.01 1.002.2·10-15 1.00 n/a n/a
P63_HUMAN -1.62 2.35 1.002.0·10-3 2.00 3.96 Concordant
ANDR_HUMAN 2.23 -0.26 0.031.00 1.83 3.35 Discordant
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Motif analysis

P63_HUMAN Concordant
P63_HUMAN pic

Genetic associations

GRASP 2 hour glucose cystatin c in serum ldl cholesterol systolic blood pressure (sbp)
GTEx eQTL Muscle_Skeletal

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