rs733920 chr17:48562341 A>C

Sequence
gttgcctccccctcagttggagac[A/C]agcattcccccagatggccagcag
ASB in cell types
AG04450 (fibroblasts)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
AG04450 (fibroblasts) 2.17 -2.16 0.041.00 1.00
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Motif analysis

No data available

Genetic associations

EMBL-EBI smoking initiation (ever regular vs never regular) (mtag)
GRASP height,  ldl cholesterol,  longstanding arthritis,  partial epilepsy,  refractive error,  rheumatoid arthritis,  spine bone mineral density (bmd)
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Lung

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