rs73410200 chr6:33768746 C>T
- Sequence
ttcccagagatagcctgcaggggg[C/T]ggggtgtgtgctgcaaggcagtgg
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) GM19240 (B cells Lymphoblastoid Cell Lines) lymphoblastoid cells
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.95 | -4.62 | 2.25 | -4.00 | Concordant |
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Motif analysis
