rs73416476 chr15:45522406 C>A
- Sequence
aacggcttgggggaggcggacggc[C/A]ggcggcgcctacttcaccggagcg
- ASB in cell types
- GM19239 (male B-cells lymphoblastoid cell line) GM18505 (female B-cells Lymphoblastoid Cell Lines) GM19240 (B cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.53 | 2.77 | 1.00 | 3.60 | Concordant | |||
| STAG1_HUMAN | -1.41 | 2.02 | 1.00 | n/a | n/a |
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Motif analysis
