rs73431508 chr15:63048217 A>G
- Sequence
gccgcggaggggccctagaagtgg[A/G]agccagagccctagtgcagtggcc
- ASB in cell types
- A549 (lung carcinoma) breast tumor hTERT-HME1(Telomerase immortalized cell line) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- JUN_HUMAN BRCA2_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.09 | 0.32 | 1.00 | n/a | No Hit | |||
| BRCA2_HUMAN | 2.59 | 0.52 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | 1.82 | -3.04 | 1.83 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Anterior_cingulate_cortex_BA24, Brain_Frontal_Cortex_BA9, Cells_Cultured_fibroblasts, Colon_Transverse, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Thyroid, Whole_Blood