rs73437489 chr22:50305910 C>G
- Sequence
caggctcagcagggcctgctgggg[C/G]caaccttggggctttctccaaccc
- ASB in cell types
- GM19239 (male B-cells lymphoblastoid cell line) GM18486 (Lymphoblastoid Cell Lines) 22RV1 (prostate carcinoma) breast tumor
- ASB for transcription factors
- CTCF_HUMAN ESR1_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.54 | 3.40 | 1.11 | 3.03 | Concordant | |||
| ESR1_HUMAN | 2.74 | -5.07 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.96 | -0.24 | 1.75 | n/a | No Hit |
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Motif analysis
