rs73445933 chr22:49951432 C>T

Sequence
ctacttgtcatgtgtgctgtggac[C/T]gcggccaggaggagctgcgtgcgt
ASB in cell types
22RV1 (prostate carcinoma) Ishikawa (endometrial adenocarcinoma)
ASB for transcription factors
ESR1_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 1.54 0.08 0.011.00 1.00 n/a No Hit
ANDR_HUMAN 2.33 0.48 0.020.96 2.75 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Muscle_Skeletal,  Nerve_Tibial

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