rs73448115 chr15:76336779 A>C
- Sequence
ggccggtgcggaatcgctccttca[A/C]ctccgcggggcagtaggagttagt
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -3.01 | 3.18 | 1.17 | 2.64 | Concordant | |||
| STAG1_HUMAN | -1.40 | 1.70 | 1.17 | n/a | n/a |
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Motif analysis
