rs73454913 chr12:130761728 G>C
- Sequence
caggccgtgagcaagtggtcgcat[G/C]cacactgctgaccacctgcctggc
- ASB in cell types
- GM02630 (Fanconi anemi) pancreas MS-1 (Small cell lung carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM02630 (Fanconi anemi) | -0.52 | 1.29 | 1.00 | |||
| pancreas | 2.50 | 0.11 | 1.25 | |||
| MS-1 (Small cell lung carcinoma) | -1.83 | 0.91 | 1.33 |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Spleen, Whole_Blood