rs73467772 chr15:89129637 C>T
- Sequence
tgaagttagcgagctgttgccccc[C/T]gggaatccagagtccagatcagca
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.69 | 1.26 | 1.27 | 2.35 | Concordant | |||
| STAG1_HUMAN | 0.15 | 1.39 | 1.08 | n/a | n/a |
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Motif analysis
