rs73511172 chr19:16449583 C>A

Sequence
aaacagactggcagtttcttaaaa[C/A]aacaacaacaaaaaaaaactaaac
ASB in cell types
monocytes from periferal blood
ASB for transcription factors
MEF2B_HUMAN SRBP2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN 2.33 -4.79 0.021.00 2.00 1.00 Weak Discordant
SRBP2_HUMAN 2.44 n/a 0.041.00 3.00 n/a No Hit
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Motif analysis

MEF2B_HUMAN Weak Discordant
MEF2B_HUMAN pic

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Nerve_Tibial,  Testis,  Thyroid

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