rs735267 chr22:35372064 G>A

Sequence
ctattttcgctaagtcaccgcccc[G/A]agatctgttttcgctgagtcacgg
ASB in cell types
breast tumor GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
FOXK2_HUMAN ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 2.34 -3.71 2.1·10-31.00 1.33 n/a No Hit
ESR1_HUMAN 2.57 0.00 0.041.00 1.38 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  rheumatoid arthritis,  years of education

Download