rs735364 chr1:86774402 G>A
- Sequence
gactcctagctatctcatgccccc[G/A]cttcctgctggcagaaagcaatgc
- ASB in cell types
- macrophages K562 (myelogenous leukemia)
- ASB for transcription factors
- CEBPB_HUMAN EGR1_HUMAN KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 2.65 | -0.40 | 2.25 | n/a | No Hit | |||
| EGR1_HUMAN | 2.31 | -4.02 | 2.00 | -2.85 | Concordant | |||
| KDM1A_HUMAN | 1.40 | n/a | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid