rs73551707 chr8:22188910 C>T
- Sequence
agcacagctgctgagcagaactgc[C/T]tggcaggcccaggaaggccacgtg
- ASB in cell types
- gastroesophageal sphincter HUES64 (embryonic stem cells) CTV-1 (Adult T acute lymphoblastic leukemia) GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.55 | -1.28 | 1.00 | -0.28 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial