rs73558260 chr6:136700325 C>T
- Sequence
gcatgaccaggtcggcagaggtgg[C/T]gatagagaaacagacacgtgcgtg
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.06 | n/a | 1.00 | -1.83 | Weak Concordant |
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Motif analysis
