rs73581403 chr14:21456048 A>G
- Sequence
aagcctacctgtgcaagtcctggt[A/G]cttcctttccaggcagcgtttcaa
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) 22RV1 (prostate carcinoma) breast tumor GM19238 (female B-cells lymphoblastoid cell lines)
- ASB for transcription factors
- SPI1_HUMAN ESR1_HUMAN ANDR_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.20 | 0.14 | 1.00 | -1.80 | Weak Concordant | |||
| ESR1_HUMAN | 2.76 | -4.99 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.55 | -0.21 | 1.80 | n/a | No Hit | |||
| STAT1_HUMAN | 1.88 | n/a | 4.00 | 2.73 | Discordant | |||
| CTCF_HUMAN | -0.08 | 0.98 | 1.20 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood