rs73593291 chr14:24436888 T>C

Sequence
atcttcccttcagaagtgggttga[T/C]actgccactcagtggtcagcttca
ASB for transcription factors
CTCF_HUMAN RAD21_HUMAN
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View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.99 0.52 1.6·10-51.00 1.33 -0.06 Weak Concordant
RAD21_HUMAN 1.59 0.26 8.2·10-31.00 1.71 n/a n/a
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Motif analysis

CTCF_HUMAN Weak Concordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Brain_Nucleus_accumbens_basal_ganglia,  Cells_Cultured_fibroblasts,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

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