rs73598516 chr10:22436950 G>A
- Sequence
acagcagtcaccgcaggggtcgcc[G/A]gggcgcggctctataaagcctcgg
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.39 | 1.91 | 1.12 | 0.47 | Weak Concordant |
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Motif analysis
