rs73606869 chr8:55925689 C>T

Sequence
tgacaccaaggcatcagaatggaa[C/T]ggaaacaccatctagaggtgctgc
ASB in cell types
GM19238 (female B-cells lymphoblastoid cell lines) GM19240 (B cells Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 3.43 -2.95 3.8·10-81.00 1.33 n/a No Hit
STAG1_HUMAN 2.49 -2.10 6.5·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Cortex Brain_Nucleus_accumbens_basal_ganglia Lung

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