rs73645257 chr9:33132356 C>T

Sequence
tcacaaaacactcatcacttgaga[C/T]ggttcttggaaaagttgtctcgtc
ASB in cell types
22RV1 (prostate carcinoma) NCI-H441 (squamous cell lung carcinoma )
ASB for transcription factors
ANDR_HUMAN NKX21_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.43 -1.47 4.4·10-31.00 2.00 n/a No Hit
NKX21_HUMAN -0.46 2.09 0.980.02 2.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Muscle_Skeletal,  Testis,  Thyroid

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