rs73670309 chr7:1026311 C>A
- Sequence
cctggcattgctgaagagccctcg[C/A]agagccagcgctccagctgctggg
- ASB in cell types
- NCI-H209 (Small cell lung carcinoma. Derived from metastatic site: Bone marrow)
- ASB for transcription factors
- NKX21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NKX21_HUMAN | -2.26 | 3.06 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Thyroid, Whole_Blood