rs73710038 chr8:127854260 G>A
- Sequence
gtgggcacaggcggagggcagggg[G/A]cattcctctgggctgactcgagcc
- ASB in cell types
- CFPAC-1(pancreatic ductal adenocarcinoma) breast tumor 22RV1 (prostate carcinoma) SUM159PT (Triple negative breast cancer)
- ASB for transcription factors
- FOXA2_HUMAN EP300_HUMAN ANDR_HUMAN TLE3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | n/a | 3.68 | 2.00 | n/a | No Hit | |||
| EP300_HUMAN | -0.27 | 1.83 | 1.15 | n/a | n/a | |||
| ANDR_HUMAN | 2.89 | 0.55 | 1.71 | n/a | No Hit | |||
| TLE3_HUMAN | 2.84 | -4.76 | 1.50 | n/a | n/a | |||
| ESR1_HUMAN | 2.54 | 0.15 | 1.95 | n/a | No Hit |
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Motif analysis
