rs737147 chr2:42788046 C>A

Sequence
ccaggcacctccctaccatgccta[C/A]ccctcagccactagctcctcctcc
ASB in cell types
HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
ZFHX2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZFHX2_HUMAN -4.08 2.60 1.002.9·10-4 1.50 n/a n/a
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  college completion,  fasting blood glucose,  homa-b,  triglycerides
GTEx eQTL Breast_Mammary_Tissue,  Colon_Transverse,  Heart_Left_Ventricle,  Nerve_Tibial,  Pituitary,  Whole_Blood

Download