rs737185 chr11:76774314 A>G

Sequence
accagagatccacacatggctcca[A/G]atgagggagcctccttctctattg
ASB in cell types
liver breast tumor
ASB for transcription factors
SP1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SP1_HUMAN 2.42 -2.16 0.021.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose,  hdl cholesterol,  rheumatoid arthritis,  triglycerides
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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