rs737204 chr19:3990293 T>C
- Sequence
aagtattgccttcatcctcatagt[T/C]caaagtgtccaccatcacattcac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) adult erythroblasts breast tumor
- ASB for transcription factors
- FOXK2_HUMAN HCFC1_HUMAN ESR1_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | n/a | 3.68 | 1.50 | n/a | No Hit | |||
| HCFC1_HUMAN | 1.10 | n/a | 3.00 | n/a | n/a | |||
| ESR1_HUMAN | 1.51 | -0.32 | 2.00 | -2.68 | Concordant | |||
| IKZF1_HUMAN | -0.60 | 1.87 | 2.00 | n/a | n/a |
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Motif analysis
