rs737260 chr16:3717472 G>A
- Sequence
cccgcagcaaaggccgcaggcggc[G/A]gccccacagcagcagcgcccgcag
- ASB in cell types
- HepG2 (hepatoblastoma) HEK293 (embryonic kidney) breast tumor A549 (lung carcinoma)
- ASB for transcription factors
- TYY1_HUMAN ZBT26_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 1.85 | 1.90 | 1.67 | n/a | No Hit | |||
| ZBT26_HUMAN | n/a | 2.05 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellum, Brain_Frontal_Cortex_BA9, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood