rs7373202 chr3:101070393 A>G
- Sequence
tggccacagccagagatgcagcac[A/G]gagcctccaggtgaggacacgctg
- ASB in cell types
- foreskin keratinocyte MCF7 (Invasive ductal breast carcinoma) spleen esophagus squamous epithelium
- ASB for transcription factors
- CTCF_HUMAN CLOCK_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.98 | 0.70 | 1.36 | -0.23 | Weak Concordant | |||
| CLOCK_HUMAN | -1.08 | 2.08 | 1.00 | n/a | No Hit |
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Motif analysis
