rs7373382 chr3:101070325 T>C
- Sequence
aaggatattggaatttcacattcc[T/C]tgggaagttaaacaagcaggaaca
- ASB in cell types
- foreskin keratinocyte PANC1 (pancreatic ductal adenocarcinoma) GM10847 (female B-cells Lymphoblastoid Cell Lines) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN P63_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.93 | 0.67 | 1.36 | n/a | No Hit | |||
| STAG1_HUMAN | 1.08 | 0.26 | 1.08 | n/a | n/a | |||
| P63_HUMAN | 2.35 | -1.83 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia