rs73743331 chr6:33746259 G>T
- Sequence
gtagatgctgatgtcatccagcct[G/T]gtgccggcctcctgccccctcccg
- ASB in cell types
- sigmoid colon LHSAR (prostate epithelial cells) PC3(bone mets prostate adenocarcinoma)
- ASB for transcription factors
- ANDR_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.17 | -0.20 | 2.00 | n/a | No Hit | |||
| EP300_HUMAN | 3.19 | -2.85 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Testis, Vagina