rs7374971 chr3:46427739 G>T

Sequence
ttgcacttttcctatttccgtaag[G/T]cctgatccaaataatccacagcag
ASB in cell types
HUES64 (embryonic stem cells) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
RAD21_HUMAN CTCF_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 3.09 -3.23 1.4·10-41.00 1.00 n/a n/a
CTCF_HUMAN 1.43 0.65 8.2·10-41.00 1.03 n/a No Hit
STAG1_HUMAN 2.25 1.08 0.041.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Caudate_basal_ganglia Colon_Transverse Pancreas Whole_Blood

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