rs737614 chr12:66169426 G>A

Sequence
acggtaaatataagcctgtaacgc[G/A]aaaccccacagaacaaaaacatca
ASB in cell types
HEK293 (embryonic kidney) breast tumor 22RV1 (prostate carcinoma) primary B-CLL cells
ASB for transcription factors
ZFX_HUMAN ESR1_HUMAN ANDR_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZFX_HUMAN 2.14 -3.52 2.1·10-31.00 2.00 n/a No Hit
ESR1_HUMAN 2.81 -0.48 6.0·10-31.00 2.00 n/a No Hit
ANDR_HUMAN 2.43 -1.71 9.4·10-31.00 1.67 0.29 Weak Discordant
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Motif analysis

ANDR_HUMAN Weak Discordant
ANDR_HUMAN pic

Genetic associations

GRASP birth weight,  hdl cholesterol,  height,  microalbuminuria
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Brain_Cortex,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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