rs73783965 chr5:127757802 T>A
- Sequence
acacacacacacacacacacactc[T/A]ctctctctctctctctcaatctgt
- ASB in cell types
- GM12891 (male B- cells lymphoblastoid cell line) foreskin keratinocyte GM19238 (female B-cells lymphoblastoid cell lines) keratinocytes
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN SNAI2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.36 | 1.59 | 1.40 | n/a | No Hit | |||
| STAG1_HUMAN | 0.81 | 3.69 | 1.00 | n/a | n/a | |||
| SNAI2_HUMAN | 2.67 | -2.54 | 1.00 | n/a | No Hit |
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