rs737866 chr22:19942586 T>C

Sequence
ctaacagacctgctttttggattt[T/C]tccagccagggatttttgtgtcct
ASB in cell types
HEK293 (embryonic kidney) MOLT-4 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
ZIC2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZIC2_HUMAN n/a 2.33 1.001.7·10-4 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  change in depression severity with serotonin reuptake inhibitors (sri),  total cholesterol
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Liver,  Muscle_Skeletal,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Thyroid

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