rs73798645 chr4:8191540 A>T
- Sequence
agcagcaaaggccagaaataacac[A/T]tggtgtgagcgctgctgaataggg
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells) CD14+ monocytes
- ASB for transcription factors
- TCF21_HUMAN STAT1_HUMAN FLI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 3.04 | n/a | 2.00 | -4.41 | Concordant | |||
| STAT1_HUMAN | 1.51 | -0.45 | 2.00 | n/a | No Hit | |||
| FLI1_HUMAN | 2.56 | -4.79 | 2.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Cells_Cultured_fibroblasts, Lung, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid