rs7383869 chr7:22708571 G>A

Sequence
ctgaatctccttaggcactctcta[G/A]tcaaatgtcctaggtcctcccaat
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ENL_HUMAN HDAC1_HUMAN KDM1A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ENL_HUMAN 2.63 -1.65 3.0·10-31.00 2.00 n/a n/a
HDAC1_HUMAN 2.40 -1.55 0.011.00 2.00 n/a n/a
KDM1A_HUMAN 2.56 -4.79 0.031.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  college completion,  homa-b,  salmonella-induced pyroptosis
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Coronary,  Artery_Tibial,  Breast_Mammary_Tissue,  Colon_Sigmoid,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Lung,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Thyroid

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