rs738935 chr22:46915508 A>T

Sequence
tcatacacctttggtgcagctgcc[A/T]gtggcactagcccgggtgtggcta
ASB in cell types
TMD8 (diffuse large B-cell lymphoma)
ASB for transcription factors
ITF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ITF2_HUMAN -4.71 2.29 1.000.03 2.00 0.67 Weak Concordant
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Motif analysis

ITF2_HUMAN Weak Concordant
ITF2_HUMAN pic

Genetic associations

GRASP abnormal involuntary movement scale,  barnes akathisia rating scale,  simpson-angus scale,  tardive dyskinesia,  tardive dyskinesia severity in schizophrenia treatment,  years of education
GTEx eQTL Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg

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