rs739035 chr22:37274784 A>G
- Sequence
ccaggggcgtgggggagagggaga[A/G]acccaaagcagaactagaccagcc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes macrophages form periferal blood
- ASB for transcription factors
- STAT1_HUMAN IKZF1_HUMAN SPI1_HUMAN RAD51_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -2.00 | 2.42 | 2.00 | -3.89 | Discordant | |||
| IKZF1_HUMAN | 1.05 | -0.20 | 1.11 | n/a | n/a | |||
| SPI1_HUMAN | 0.61 | 1.93 | 1.54 | 2.51 | Concordant | |||
| RAD51_HUMAN | 2.27 | -2.27 | 1.00 | n/a | n/a |
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Motif analysis
