rs7399010 chr12:131410927 G>A
- Sequence
ttccccacccctacctagacctct[G/A]taaatagcctctgcattgaactct
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN GATA3_HUMAN ARI1A_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.75 | -0.29 | 1.66 | n/a | No Hit | |||
| FOXA1_HUMAN | 3.38 | n/a | 1.50 | -1.95 | Weak Concordant | |||
| GATA3_HUMAN | 1.51 | -1.51 | 1.00 | n/a | No Hit | |||
| ARI1A_HUMAN | 1.79 | -1.06 | 1.00 | n/a | No Hit |
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Motif analysis
