rs7402982 chr15:98650040 A>G
- Sequence
cgcgacccgcacctcgccccttcc[A/G]tgcgcaagagcctctccgcacaca
- ASB in cell types
- HEK293 (embryonic kidney) RCH-ACV (B acute lymphoblastic leukemia with t(1;19)(q23;p13.3) E2A-PBX1 (TCF3-PBX1)) A549 (lung carcinoma)
- ASB for transcription factors
- KMT2A_HUMAN GLIS1_HUMAN BRD4_HUMAN JUN_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KMT2A_HUMAN | 1.78 | -0.39 | 1.00 | 1.18 | Weak Discordant | |||
| GLIS1_HUMAN | 3.08 | -5.59 | 2.00 | n/a | No Hit | |||
| BRD4_HUMAN | 1.21 | 0.45 | 1.60 | n/a | n/a | |||
| JUN_HUMAN | 1.61 | 0.70 | 1.00 | n/a | No Hit |
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Motif analysis
