rs7403826 chr16:88287561 A>T

Sequence
cccatgctggcaaaactgtagctc[A/T]ctttttatctggtggatcatttta
ASB in cell types
SK-N-SH (neuroblastoma) T-ALL cells from peripheral blood esophagus squamous epithelium glioblastoma cells
ASB for transcription factors
SNAI2_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNAI2_HUMAN 1.50 -0.51 0.031.00 1.50 n/a No Hit
STAG1_HUMAN -0.14 1.31 1.000.05 1.13 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts

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