rs7404416 chr16:3364937 C>T

Sequence
tctcagcatatgacgcaaggcggg[C/T]ttcattaatgaaattgctgtcaat
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
ENL_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ENL_HUMAN n/a 2.99 1.007.3·10-3 1.50 n/a n/a
IKZF2_HUMAN -2.34 2.45 1.000.01 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Brain_Nucleus_accumbens_basal_ganglia Cells_Cultured_fibroblasts Esophagus_Muscularis Heart_Atrial_Appendage Liver Lung Nerve_Tibial Pancreas Thyroid

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