rs7406347 chr17:81727598 T>C
- Sequence
aggcaagtcagcgcaggccgaagc[T/C]gacgacgcgaagacaatgaggaga
- ASB in cell types
- HepG2 (hepatoblastoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN GABP1_HUMAN RING2_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | n/a | 3.60 | 2.00 | n/a | No Hit | |||
| GABP1_HUMAN | n/a | 2.27 | 2.00 | n/a | n/a | |||
| RING2_HUMAN | n/a | 2.08 | 2.00 | n/a | n/a | |||
| CREB1_HUMAN | -0.44 | 1.30 | 2.00 | n/a | No Hit | |||
| SOX13_HUMAN | -4.88 | 2.79 | 2.00 | n/a | No Hit |
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