rs7408340 chr19:4328377 C>A
- Sequence
agctctgattccgccaccagtgta[C/A]tctgctcagctctgactccacccg
- ASB in cell types
- K562 (myelogenous leukemia) renal cortex CD34+ hematopoietic stem cells-derived proerythroblasts
- ASB for transcription factors
- CREB1_HUMAN GATA1_HUMAN E2F8_HUMAN NCOA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | 2.91 | -0.39 | 1.50 | n/a | No Hit | |||
| GATA1_HUMAN | -1.32 | 2.08 | 2.00 | 3.46 | Concordant | |||
| E2F8_HUMAN | n/a | 2.41 | 2.00 | n/a | No Hit | |||
| NCOA1_HUMAN | n/a | 0.54 | 6.00 | n/a | n/a | |||
| HTF4_HUMAN | n/a | 1.12 | 3.00 | n/a | No Hit |
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Motif analysis
